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Thousands of Species Found in a Lake Cut Off From the World for Millions of Years

Lake Vostok lies beneath 2.4 miles of the Antarctic Eastern Ice Sheet. Photo: NASA / GSFC

In a lake cut off from the world for maybe as much as 15 million years, beneath 2.4 miles of Antarctic glacier ice, scientists have discovered as many as 3,507 different species representing everything from bacteria and fungi to, maybe, even more complex multicellular life.

In 1956, Russian scientists set up the Vostok research station on a relatively flat patch of ice in the heart of Antarctica’s eastern ice sheet. Research soon showed that the reason the terrain was so smooth was because the camp was resting far above a giant lake—subglacial Lake Vostok. Starting around 35 million years ago, ancient climate change turned Antarctica from a green landscape into an icy one. The change in climate trapped Lake Vostok beneath the growing East Antarctic Ice Sheet, and, as the sea receded, the lake was cut off from the ocean.

Two decades ago, Russian scientists began the long project of drilling down into Lake Vostok, a mission they finally completed in February 2012. With the drilling done, the work of trying to figure out if anything is alive down there began.

Scientists working with water from Lake Vostok have found genetic material that they think represents up to 3,507 different species, they report in a recent paper. The genetic material came from lake water that had frozen to the bottom of the Antarictic glacier. Comparing the genetic material against a database of species from around the world that have had their genes sequenced the scientists say that more than a thousand of these line up with known lifeforms. The identified species were mostly bacteria, though there were also some eukaryotes (mostly fungi), and there were two species of archaea. NBC’s Alan Boyle describes what the genes might mean:

The sequences included close matches for various types of fungi as well as arthropods, springtails, water fleas and a mollusk. What’s more, some of the bacteria from the sample are typically found in fish guts — suggesting that the fish they came from may be swimming around in the lake.

…”While the current conditions are different than earlier in its history, the lake seems to have maintained a surprisingly diverse community of organisms,” the researchers wrote. “These organisms may have slowly adapted to the changing conditions in Lake Vostok during the past 15-35 million years as the lake converted from a terrestrial system to a subglacial system.”

A significant number of the sequences were linked to organisms that live around deep-sea hydrothermal vents, suggesting that such features exist at the bottom of Lake Vostok as well. “Hydrothermal vents could provide sources of energy and nutrients vital for organisms living in the lake,” the researchers said.

One of the scientists who worked on the study, Scott Rogers, explained to NBC’s Boyle that the fact that other genetic sequences didn’t line up with anything we’ve seen before doesn’t necessarily mean that these are entirely new species living down in subglacial Lake Vostok. Rogers says that though some of the lifeforms down there will probably be brand new, some of them are probably just things we already know about but whose genes haven’t been studied in-depth and put in the particular database the researchers used.

If these findings hold up and if there is life in Lake Vostok that is truly unique on Earth, the finding would be a testament to the hardiness of life. It would be a reassurance that life can persist in some of the harshest conditions and an encouraging finding for those looking for life elsewhere in the universe.

More from Smithsonian.com:

No Life Found In Lakes Beneath Antarctic Glaciers—Yet
Brand New, Never Before Seen Bacteria Found in Frozen Antarctic Lake—Maybe

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Thousands of Species Found in a Lake Cut Off From the World for Millions of Years

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Plan a Psychedelic Wedding with Glowing Dresses Made from Material from Engineered Silkworm

Photo: Tansil et al., Advanced Materials

Bridesmaids often complain about the unsightly beige, tangerine or chartreuse dress they have to purchase for their friend’s big event, and will no doubt wear only once. Now, a Japanese designer has managed to add an additional layer of oddity to wedding and bridesmaid dresses: glowing materials made from silk produced by genetically engineered silkworms. Wired reports:

These silkworms, unlike others that have been fed rainbow-colored dyes, don’t need any dietary interventions to spin in color: They’ve been genetically engineered to produce fluorescent skeins in shades of red, orange, and green.

This isn’t the first time silkworms have been genetically engineered, Wired points out. Some silkworms’ had their genomes tweaked in order to produce spider silk or human collagen proteins.

In this case, the researchers looked to animals that naturally produce fluorescent molecules, including corals and jellyfish. Depending upon what colored glow they wanted their silkworms to produce, Wired explains, they took the corresponding animal’s DNA sequence that produced those glowing colors and inserted it into the silkworm genome.

The resulting silks glow under fluorescent light, and are only ever-so-slightly weaker than silks that are normally used for fabrics, scientists reported June 12 in Advanced Functional Materials. Already, the glowing silks have been incorporated into everyday garments such as suits and ties, and Japanese wedding dress designer Yumi Katsura has designed and made gowns that glow in the dark.

The team says they see potential for the glowing silk to be used for some medical technologies, though the rad fabric is likely to prove be a hit at quirky weddings well before.

More from Smithsonian.com:

Spin Cycle  
How Old Is That Silk Artifact?

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Plan a Psychedelic Wedding with Glowing Dresses Made from Material from Engineered Silkworm

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For Immediate In-the-Moment Happiness, Head Outdoors

Photo: Ian Britton

A wealth of studies have examined the hypothesis that spending time outdoors boosts our well-being, but until now not much was known about how being outside affects what researchers call “momentary subjective well-being,” a fancy term for how you feel in-the-moment. Unless scientists follow participants around with a clip board asking them “How do you feel?” every few minutes, collecting such fleeting data remains a challenge.

A new study on happiness conducted in the UK gets over this obstacle by using a specially-designed smartphone app. More than 20,000 people installed the app on their phone. At random intervals throughout the day, the app would pop up and ask them brief questions about what they were up to, who they were with and how they were feeling. At the same time, it registered the phone owner’s GPS coordinates.

All told, the team collected around 1 million datapoints from the app-wielding participants. The results were telling: even when the authors controlled for factors like weather, time of day, where people where, if they were with friends or family and what they were doing, being outside trumped all of that for predicting in-the-moment happiness. On average, they found, the participants were significantly and substantially happier when they were outside surrounded by green or in a natural habitat. This finding was especially true when compared with their happiness levels while in an urban environment.

The authors conclude, “This study provides a new line of evidence on links between nature and wellbeing, strengthening existing evidence of a positive relationship between [subjective well-being] and exposure to green or natural environments in daily life.”

So if you’re feeling down or unenthusiastic, head outside for a few minutes and soak up the sunshine in a local park or backyard. It might just provide the positive boost you need to turn your day around – or at least bring some emotional warmth for a fleeting moment.

More from Smithsonian.com:

We Have No Idea What Makes Us Happy  
The (Scientific) Pursuit of Happiness 

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For Immediate In-the-Moment Happiness, Head Outdoors

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This Is an Actual Photo of a Planet in Another Solar System

The little blue splotch is the planet HD95086 b. It’s about four or five times the mass of Jupiter and it orbits a star 300 light years away. The planet’s star doesn’t actually look like a clip art star–the astronomers had to cover the star so they could see the comparatively faint planet. Photo: European Southern Observatory

See that little blue smudge? That’s another planet.

It’s named HD95086 b, and it’s orbiting a star 300light years away. This is one of the first times in human history that we’ve ever laid eyes on a planet in another solar system, a planet that isn’t orbiting the Sun.

Thanks to the Kepler telescope we know that thousands, perhaps billions of planets exist out there in the universe. But we haven’t actually seen very many of themKepler found planets by looking for the absence of starlight—it registered a planet’s presence when the light from a star dipped, as a planet passed in front. Other techniques let astronomers measure the presence of a planet by calculating how the star wobbles because of the gravitational pull of the orbiting planet. But this is different. The photo above is of a planet in a different solar system as seen through a telescope.

It’s really, really hard to see planets like this one directly. You need a big, advanced telescope. To see HD95086 b, astronomers with the European Southern Observatory used the Very Large Telescope. (Yes, that’s its real name.) The movement of the atmosphere, which a telescope on the ground needs to look through, can perturb the view. The Very Large Telescope is equipped with adaptive optics, a way for the instruments to account for the atmospheric distortion and clean up the image. The astronomers also used a technique to bump up the contrast so that they could see the faint planet.

According to Elizabeth Howell for Universe Today, the new planet is around four or five times as big as Jupiter and orbits its star at a distance about twice the distance between the Sun and Neptune. The star itself, says Howell, is a “baby” compared to the Sun: it’s just 17 million years old, compared to our star’s 4.5 billion years.

More from Smithsonian.com:

So Long, Kepler: NASA’s Crack Exoplanet-Hunter Falls to Mechanical Failure
17 Billion Earth-Size Planets! An Astronomer Reflects on the Possibility of Alien Life

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This Is an Actual Photo of a Planet in Another Solar System

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A Friendly Reminder From Pretty Much Every Climate Scientist in the World: Climate Change Is Real

For the first time in human history the atmospheric concentration of carbon dioxide has reached 400 parts per million. Photo: Mauna Loa Observatory

There’s an interesting relationship, borne out in polling numbers, between the “general public’s” belief in global climate change and the weather. When it’s hot out, people believe in climate change. When it’s cold, they don’t.  When summer heat and drought and wildfires tore through the U.S. last summer, 74 percent of Americans believed that climate change was affecting the weather. Only 46 percent of Americans think that this climate change is caused by human activities – most directly the burning of fossil fuels.

The numbers are a little different when it is climate scientists, and the scientific research conducted on climate change, that are polled.

Writing in the GuardianDana Nuccitelli and John Abraham describe a new study that polled the recent research to see what scientists thought of climate change. (Nuccitelli is one of the voices behind the website Skeptical Science and one of the authors of the new scientific study.) They found that the vast, overwhelming majority of climate scientists agree that humans are causing climate change.

The team searched a database of scientific studies for the words “global climate change” or “global warming.” They found 11,944 relevant studies published between 1991 and 2012. Then, they read through the study’s summaries to figure out whether the study supported, rejected, was uncertain about or said nothing at all about our role in causing climate change. They also asked the scientists behind the papers whether their research supported or refuted the idea of man-made global warming.

Of the studies that expressed some sort of position on global warming, of which there were 4,000, the team write in their paper, “97.1% endorsed the consensus position that humans are causing global warming.” When the climate scientists themselves said whether or not their work supported the idea of anthropogenic climate change, “97.2% endorsed the consensus.”

For the papers that didn’t seem to have an opinion on whether humans were causing climate change, the reason, they write, is not that the scientists don’t know. Rather, it’s that the debate is so fully and completely settled within the scientific community that they aren’t going to use space re-hashing old fights.

Some people may mention that the scientific community is conflicted over the cause of climate change. This new survey would like to remind that that is not true.

More from Smithsonian.com:

Three Quarters of Americans Now Believe Climate Change Is Affecting the Weather
We’re About to Pass a Disheartening New Climate Change Milestone

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A Friendly Reminder From Pretty Much Every Climate Scientist in the World: Climate Change Is Real

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Scientists Just Recorded the Brightest Explosion We’ve Ever Seen

When a huge star collapses in a supernova, it can produce a gamma-ray burst, spires of tightly-concentrated energy shooting from the dying star. Photo: NASA

A star being ripped to shreds in a violent supernova is one of the most powerful explosions in the universe. The largest supernovae can produce gamma-ray bursts: a tightly concentrated lance of light that streams out into space. Gamma-ray bursts, says NASA, “are the most luminous and mysterious explosions in the universe.”

The blasts emit surges of gamma rays — the most powerful form of light — as well as X-rays, and they produce afterglows that can be observed at optical and radio energies.

Two weeks ago, says NASA, astronomers saw the longest and brightest gamma-ray burst ever detected. It was the biggest shot of energy we’ve ever seen, streaming from the universe’s most powerful class of explosions. NASA:

“We have waited a long time for a gamma-ray burst this shockingly, eye-wateringly bright,” said Julie McEnery, project scientist for the Fermi Gamma-ray Space Telescope at NASA’s Goddard Space Flight Center in Greenbelt, Md.

“The event, labeled GRB 130427A, was the most energetic gamma-ray burst yet seen, and also had the longest duration,” says Matthew Francis for Ars Technica. “The output from GRB 130427A was visible in gamma ray light for nearly half a day, while typical GRBs fade within a matter of minutes or hours.”

The gamma-ray burst was a stunningly bright spot against the background gamma ray radiation. Photo: NASA

There are a few different of classes of gamma-ray bursts in the world. Astrophysicists think that some—short gamma-ray bursts—form when two neutron stars merge and emit a pulse of energy. Huge ones like the one just detected are known as long gamma-ray bursts, and they form when huge stars collapse, often leading to the formation of a black hole.

Gamma-ray bursts focus their energy in a tightly-concentrated spire of energy. A few years ago, says Wired, researchers calculated what would happen if a gamma-ray burst went off nearby, and was pointed at the Earth.

Steve Thorsett of Princeton University has calculated the consequences if such a merger were to take place within 3,500 light-years of Earth, with its energy aimed at the solar system. The blast would bathe Earth in the equivalent of 300,000 megatons of TNT, 30 times the world’s nuclear weaponry, with the gamma-ray and X-ray radiation stripping Earth of its ozone layer.

While scientists cannot yet predict with any precision which nearby stars will go supernova, the merger of neutron star binaries is as predictable as any solar eclipse. Three such binary systems have been discovered, and one, PSR B1534+12, presently sits about 3,500 light-years away and will coalesce in a billion years.

More from Smithsonian.com:

Hubble’s Ugliest Photographs
Astronomers Discover Baby Supernovae

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Scientists Just Recorded the Brightest Explosion We’ve Ever Seen

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Hurricanes May Cause Earthquakes

Repair crews inspect for damage after the 2011 Virginia earthquake. Photo: National Park Service

On August 23, 2011 a rare magnitude 5.8 earthquake hit Virginia. The shaking cracked the Washington Monumenttoppled part of the National Cathedral and shook around a third of the U.S. population. Later that week, Hurricane Irene moved into the region, wiping out power, downing trees and, according to new research presented at the meeting of Seismological Society of America, says Nature, triggering more small earthquakes in the recently ruptured fault.

The rate of aftershocks usually decreases with time, says study leader Zhigang Peng, a seismologist at the Georgia Institute of Technology in Atlanta. But instead of declining in a normal pattern, the rate of aftershocks following the 23 August, 2012 [sic], earthquake near Mineral, Virginia, increased sharply as Irene passed by.

The waves of the Virginia earthquake were felt far and wide.

Hurricanes are known to produce strong seismic waves all by themselves. Indeed, says Smithsonian‘s Surprising Science blog, Hurricane Sandy “generated seismic shaking as far away as Seattle.” But hurricane-triggered seismic waves these were not. These were real aftershocks. “Scientists did not initially notice the unusual pattern, Peng said, because the aftershocks were small (many below magnitude 2) and the hurricane itself produced a lot of seismic noise.” A careful analysis of the data, however, revealed that the aftershock activity actually rose around the time of the hurricane’s passing.

The scientists, says Nature, argue that “a decrease in pressure caused by the storm’s travel up the East Coast might have reduced forces on the fault enough to allow it to slip.” More research will be needed to definitively pin down the proposed tie between the hurricane and the earthquake. But the suggestion that the Virginia fault system would have been susceptible to the stresses caused by the hurricane aligns well with the idea that big natural systems, sometimes treated as if they act independently of the world around them, might actually all be connected.

The Irene-triggered aftershocks could have happened because the fault system that had ruptured in Virginia has memory—that is, the fact that it slipped so recently makes it easier for it to do so again. The idea of a natural system having memory is one that is becoming increasingly important for scientists trying to understand natural disasters. The idea is important to the field of complexity science. In a previous interview by this author with Surjalal Sharma, the University of Maryland astronomer explains this idea of memory:

“Memory is, essentially, a correlation in time or space. My memory of past events affects what I do now; that’s long range or long-term correlation. The bunching or clustering of events is, as we understand it, due to the memory of the events in a system. That is, a sequence of natural disasters may not be just a coincidence. [I]f we look at the data for floods, earthquakes, or solar storms, we see that their distributions are [not shaped like a bell curve.] This indicates that these are not random events. Rather, these systems have long-term memory.

So in the case of space weather, let’s imagine that a coronal mass ejection reached the Earth and disturbed the magnetosphere. There are two things about this disturbance that we need to characterize: one, how long does the visible or measurable effect of the disturbance last? The other is, how long would this system remember that the disturbance happened? If a second coronal mass ejection were then to come along within the memory time scale, the disturbance is likely to be much bigger and more prominent in some ways than the first, even if the two ejections are of similar intensity. It is in this context that we have to worry about long-term memory. As one might imagine, this is very important for extreme events.”

A fault that has slipped as an earthquake loads more stress. More research is needed, but if it turns out to be the case that hurricanes really can cause earthquakes, then Gaea just got a whole lot more dangerous.

More from Smithsonian.com:
Oklahoma’s Biggest-Ever Earthquake Was Likely Man-Made
Hurricane Sandy Generated Seismic Shaking As Far Away As Seattle

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Hurricanes May Cause Earthquakes

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Life on Earth May Have Been Seeded by Comets

Image: Michael Karrer

One of the oldest questions on earth is how all this crazy life started. Where did you come from? How about your office plant, or your cat? For a long time, our only working idea was that gods from the heavens had provided the seed of life. We may, at least, have been looking into the correct direction: researchers at UC Berkeley recently added evidence to the idea that life on Earth came from a comet.

The idea goes like this: the so-called “building blocks of life” on this planet are called dipeptides. And the real mystery is where these dipeptides came from. The Berkeley scientists’ research suggests that dipeptides could have formed on interplanetary dust and been carried down to earth on a comet. Berkeley writes:

Chemists from the University of California, Berkeley, and the University of Hawaii, Manoa, showed that conditions in space are capable of creating complex dipeptides – linked pairs of amino acids – that are essential building blocks shared by all living things. The discovery opens the door to the possibility that these molecules were brought to Earth aboard a comet or possibly meteorites, catalyzing the formation of proteins (polypeptides), enzymes and even more complex molecules, such as sugars, that are necessary for life.

Or, in the paper itself, the authors put it this way:

Our results indicate that the radiation-induced, non-enzymatic formation of proteinogenic dipeptides in interstellar ice analogs is facile. Once synthesized and incorporated into the ”building material” of solar systems, biomolecules at least as complex as dipeptides could have been delivered to habitable planets such as early Earth by meteorites and comets, thus seeding the beginning of life as we know it.

They figured this out by making a mini-comet in the lab. Combining carbon dioxide, ammonia and other chemicals like methane at super cold temperatures (space is pretty cold), they created a tiny comet-like thing. Then they added the lab equivalent of cosmic rays, zapping the mini-comet with electrons. What they saw was that the combination of these high energy electrons and the comet they had built created organic molecules like amino acids and dipeptides.

The idea is that this reaction happened on its own in space, and those dipeptides were carried down to earth on that icy comet. In other words, the necessary blocks of life might really have descended to Earth from the sky.

More from Smithsonian.com:

The Origins of Life

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Life on Earth May Have Been Seeded by Comets

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